Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HSERO_RS05575 | Not Available | Negative | 1262870 - 1263805 | 35278.0 |
| cardiolipin synthase | HSERO_RS05580 | Not Available | Negative | 1263839 - 1265257 | 52701.1 |
| sulfite reductase flavoprotein subunit alpha | HSERO_RS05585 | Not Available | Negative | 1265506 - 1268058 | 94289.9 |
| alpha/beta hydrolase | HSERO_RS05590 | Not Available | Negative | 1268220 - 1269053 | 30746.7 |
| lysr family transcriptional regulator | HSERO_RS05595 | Not Available | Negative | 1269077 - 1269997 | 34293.4 |
| mfs transporter | HSERO_RS05600 | Not Available | Positive | 1270200 - 1271543 | 47137.1 |
| homogentisate 1,2-dioxygenase | HSERO_RS05605 | Not Available | Positive | 1271540 - 1272877 | 49367.2 |
| fumarylacetoacetase | HSERO_RS05610 | Not Available | Positive | 1272874 - 1274220 | 48174.9 |
| maleylacetoacetate isomerase | HSERO_RS05615 | Not Available | Positive | 1274256 - 1274903 | 24075.0 |
| maoc family dehydratase | HSERO_RS05620 | Not Available | Negative | 1274919 - 1275431 | 18810.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


