Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | HSERO_RS05525 | Not Available | Positive | 1252551 - 1253180 | 21471.4 |
| prolipoprotein diacylglyceryl transferase | HSERO_RS05530 | Not Available | Negative | 1253395 - 1254231 | 31130.0 |
| lysr family transcriptional regulator | HSERO_RS05535 | Not Available | Negative | 1254326 - 1255228 | 32575.0 |
| c-type cytochrome | HSERO_RS05540 | Not Available | Positive | 1255459 - 1255773 | 10885.4 |
| transketolase family protein | HSERO_RS05545 | Not Available | Negative | 1255837 - 1256841 | 36342.3 |
| transketolase | HSERO_RS05550 | Not Available | Negative | 1256838 - 1257683 | 30668.2 |
| trap transporter large permease subunit | HSERO_RS05555 | Not Available | Negative | 1257724 - 1259580 | 65077.5 |
| trap transporter substrate-binding protein | HSERO_RS05560 | Not Available | Negative | 1259577 - 1260623 | 38168.6 |
| sdr family nad(p)-dependent oxidoreductase | HSERO_RS05565 | Not Available | Negative | 1260697 - 1261446 | 25595.2 |
| lysr substrate-binding domain-containing protein | HSERO_RS05570 | Not Available | Positive | 1261673 - 1262560 | 32549.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


