Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gluconokinase | HSERO_RS05475 | Not Available | Positive | 1238476 - 1240038 | 56196.8 |
| sdr family nad(p)-dependent oxidoreductase | HSERO_RS05480 | Not Available | Positive | 1240197 - 1240991 | 27799.4 |
| l-idonate 5-dehydrogenase | HSERO_RS05485 | Not Available | Positive | 1241020 - 1242057 | 36779.8 |
| methyl-accepting chemotaxis protein | HSERO_RS05490 | Not Available | Positive | 1242286 - 1243839 | 55405.3 |
| hypothetical protein | HSERO_RS05495 | Not Available | Positive | 1244166 - 1245071 | 31764.9 |
| transaldolase | HSERO_RS05500 | Not Available | Negative | 1245187 - 1246122 | 34201.1 |
| sis domain-containing protein | HSERO_RS05505 | Not Available | Negative | 1246224 - 1247078 | 30669.2 |
| glucose-6-phosphate dehydrogenase | HSERO_RS05510 | Not Available | Negative | 1247122 - 1248588 | 55197.2 |
| glucose-6-phosphate isomerase | HSERO_RS05515 | Not Available | Negative | 1248665 - 1250329 | 61837.4 |
| phosphogluconate dehydratase | HSERO_RS05520 | Not Available | Positive | 1250683 - 1252554 | 65543.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


