Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| plp-dependent aminotransferase family protein | HSERO_RS05425 | Not Available | Positive | 1197605 - 1199155 | 56854.9 |
| zinc-binding alcohol dehydrogenase family protein | HSERO_RS05430 | Not Available | Positive | 1199288 - 1200289 | 35708.2 |
| hemolysin family protein | HSERO_RS05435 | Not Available | Positive | 1200496 - 1201818 | 48993.7 |
| helix-turn-helix domain-containing protein | HSERO_RS05440 | Not Available | Negative | 1201994 - 1202404 | 15023.3 |
| ig-like domain-containing protein | HSERO_RS05445 | Not Available | Negative | 1202536 - 1208184 | 202107.0 |
| hypothetical protein | HSERO_RS05450 | Not Available | Negative | 1208609 - 1232659 | 838001.0 |
| hypothetical protein | HSERO_RS24660 | Not Available | Positive | 1232658 - 1232894 | 8731.6 |
| gamma-glutamyltransferase | HSERO_RS05455 | Not Available | Negative | 1233312 - 1235069 | 62689.4 |
| laci family dna-binding transcriptional regulator | HSERO_RS05460 | Not Available | Negative | 1235310 - 1236368 | 38325.1 |
| gntp family permease | HSERO_RS05470 | Not Available | Positive | 1237067 - 1238419 | 47597.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


