Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| heavy metal sensor histidine kinase | HSERO_RS00080 | Not Available | Positive | 24046 - 25449 | 51471.0 |
| helix-turn-helix domain-containing protein | HSERO_RS00085 | Not Available | Negative | 25497 - 25766 | 10308.3 |
| duf445 domain-containing protein | HSERO_RS00090 | Not Available | Positive | 26030 - 27307 | 47818.1 |
| acyl-coa synthetase | HSERO_RS00095 | Not Available | Negative | 27327 - 28949 | 58611.1 |
| type vi secretion system vgr family protein | HSERO_RS00100 | Not Available | Positive | 29277 - 32018 | 100883.0 |
| esterase/lipase family protein | HSERO_RS00105 | Not Available | Positive | 32022 - 33752 | 63905.8 |
| t6ss immunity protein tli4 family protein | HSERO_RS00110 | Not Available | Positive | 33842 - 34816 | 36463.3 |
| t6ss immunity protein tli4 family protein | HSERO_RS00115 | Not Available | Positive | 34891 - 35952 | 39649.3 |
| esterase/lipase family protein | HSERO_RS00120 | Not Available | Positive | 35949 - 37553 | 59424.1 |
| t6ss immunity protein tli4 family protein | HSERO_RS00125 | Not Available | Positive | 37678 - 38736 | 39194.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


