Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | HSERO_RS05325 | Not Available | Positive | 1177238 - 1178224 | 33664.6 |
| sdr family oxidoreductase | HSERO_RS05330 | Not Available | Positive | 1178277 - 1179008 | 26296.1 |
| fggy-family carbohydrate kinase | HSERO_RS05335 | Not Available | Positive | 1179050 - 1180696 | 57161.4 |
| sdr family oxidoreductase | HSERO_RS05340 | Not Available | Positive | 1180711 - 1181436 | 24745.1 |
| glycine zipper 2tm domain-containing protein | HSERO_RS05345 | Not Available | Negative | 1181566 - 1181781 | 6665.21 |
| alpha/beta fold hydrolase | HSERO_RS05350 | Not Available | Positive | 1182029 - 1183108 | 39009.9 |
| hypothetical protein | HSERO_RS05355 | Not Available | Positive | 1183108 - 1183845 | 28105.0 |
| arac family transcriptional regulator | HSERO_RS05360 | Not Available | Negative | 1183879 - 1184892 | 36432.1 |
| mfs transporter | HSERO_RS05365 | Not Available | Positive | 1184972 - 1186240 | 42765.0 |
| glutathione s-transferase family protein | HSERO_RS05370 | Not Available | Positive | 1186452 - 1187072 | 21858.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


