Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)/fad-dependent oxidoreductase | HSERO_RS05275 | Not Available | Positive | 1167539 - 1168825 | 47724.9 |
| duf1365 domain-containing protein | HSERO_RS05280 | Not Available | Positive | 1168822 - 1169673 | 31966.7 |
| sam-dependent methyltransferase | HSERO_RS05285 | Not Available | Positive | 1169670 - 1170881 | 46034.7 |
| duf3833 domain-containing protein | HSERO_RS05290 | Not Available | Positive | 1170885 - 1171454 | 21484.8 |
| sdr family nad(p)-dependent oxidoreductase | HSERO_RS05295 | Not Available | Positive | 1171451 - 1172302 | 30866.5 |
| nuclear transport factor 2 family protein | HSERO_RS05300 | Not Available | Positive | 1172305 - 1172721 | 16348.5 |
| mgtc/sapb family protein | HSERO_RS05305 | Not Available | Negative | 1172718 - 1173434 | 25293.5 |
| helix-turn-helix domain-containing protein | HSERO_RS05310 | Not Available | Positive | 1173723 - 1174607 | 33131.8 |
| abc transporter substrate-binding protein | HSERO_RS05315 | Not Available | Positive | 1174765 - 1175673 | 31534.5 |
| sugar abc transporter atp-binding protein | HSERO_RS05320 | Not Available | Positive | 1175740 - 1177248 | 54757.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


