Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| smp-30/gluconolactonase/lre family protein | HSERO_RS05225 | Not Available | Positive | 1157330 - 1158208 | 31713.4 |
| iclr family transcriptional regulator | HSERO_RS05230 | Not Available | Negative | 1158228 - 1159076 | 31424.8 |
| l-fuconate dehydratase | HSERO_RS05235 | Not Available | Positive | 1159430 - 1160707 | 47618.3 |
| sdr family oxidoreductase | HSERO_RS05240 | Not Available | Positive | 1160755 - 1161531 | 27967.3 |
| l-rhamnose mutarotase | HSERO_RS05245 | Not Available | Positive | 1161539 - 1161901 | 13914.6 |
| sugar abc transporter atp-binding protein | HSERO_RS05250 | Not Available | Positive | 1162060 - 1163622 | 56726.0 |
| abc transporter permease | HSERO_RS05255 | Not Available | Positive | 1163660 - 1164703 | 36420.6 |
| abc transporter substrate-binding protein | HSERO_RS05260 | Not Available | Positive | 1164838 - 1165728 | 31496.9 |
| amidohydrolase family protein | HSERO_RS05265 | Not Available | Positive | 1165852 - 1166721 | 32006.2 |
| tetr/acrr family transcriptional regulator | HSERO_RS05270 | Not Available | Negative | 1166740 - 1167360 | 23026.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


