Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar abc transporter atp-binding protein | HSERO_RS05175 | Not Available | Positive | 1143757 - 1145307 | 56423.8 |
| abc transporter permease | HSERO_RS05180 | Not Available | Positive | 1145304 - 1146383 | 37226.4 |
| galactofuranose abc transporter, permease protein yjff | HSERO_RS05185 | Not Available | Positive | 1146380 - 1147402 | 35722.1 |
| multiple monosaccharide abc transporter substrate-binding protein | HSERO_RS05190 | Not Available | Positive | 1147622 - 1148695 | 38669.6 |
| multiple monosaccharide abc transporter atp-binding protein | HSERO_RS05195 | Not Available | Positive | 1148902 - 1150458 | 57109.5 |
| multiple monosaccharide abc transporter permease | HSERO_RS05200 | Not Available | Positive | 1150533 - 1151750 | 43052.4 |
| ilvd/edd family dehydratase | HSERO_RS05205 | Not Available | Positive | 1151844 - 1153601 | 63137.2 |
| sdr family nad(p)-dependent oxidoreductase | HSERO_RS05210 | Not Available | Positive | 1153665 - 1154450 | 28400.9 |
| lysr family transcriptional regulator | HSERO_RS05215 | Not Available | Negative | 1154748 - 1155689 | 34649.6 |
| porin | HSERO_RS05220 | Not Available | Positive | 1156013 - 1157137 | 39469.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


