Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type i methionyl aminopeptidase | HSERO_RS05130 | Not Available | Negative | 1134459 - 1135256 | 28757.4 |
| eama family transporter | HSERO_RS05135 | Not Available | Negative | 1135358 - 1136230 | 30477.4 |
| marr family winged helix-turn-helix transcriptional regulator | HSERO_RS05140 | Not Available | Positive | 1136293 - 1136817 | 19636.8 |
| mfs transporter | HSERO_RS05145 | Not Available | Negative | 1136841 - 1138013 | 39997.9 |
| galactonate dehydratase | HSERO_RS05150 | Not Available | Negative | 1138305 - 1139453 | 42387.7 |
| 2-dehydro-3-deoxy-6-phosphogalactonate aldolase | HSERO_RS05155 | Not Available | Negative | 1139550 - 1140188 | 21994.7 |
| 2-dehydro-3-deoxygalactonokinase | HSERO_RS05160 | Not Available | Negative | 1140221 - 1141180 | 34063.9 |
| aldose 1-epimerase | HSERO_RS05165 | Not Available | Negative | 1141194 - 1142168 | 36857.9 |
| hypothetical protein | HSERO_RS24655 | Not Available | Negative | 1142319 - 1142471 | 5703.88 |
| abc transporter substrate-binding protein | HSERO_RS05170 | Not Available | Positive | 1142671 - 1143645 | 34953.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


