Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pep-cterm sorting domain-containing protein | HSERO_RS05080 | Not Available | Positive | 1122668 - 1123348 | 24157.5 |
| abc transporter permease | HSERO_RS05085 | Not Available | Negative | 1123508 - 1124551 | 36383.7 |
| sugar abc transporter atp-binding protein | HSERO_RS05090 | Not Available | Negative | 1124554 - 1126116 | 56526.4 |
| substrate-binding domain-containing protein | HSERO_RS05095 | Not Available | Negative | 1126203 - 1127210 | 35412.7 |
| abc transporter permease | HSERO_RS05100 | Not Available | Negative | 1127262 - 1128275 | 35668.7 |
| ribokinase | HSERO_RS05105 | Not Available | Negative | 1128303 - 1129262 | 32545.8 |
| rbsd/fucu family protein | HSERO_RS05110 | Not Available | Negative | 1129265 - 1129717 | 16431.1 |
| aldehyde dehydrogenase family protein | HSERO_RS05115 | Not Available | Negative | 1129918 - 1132299 | 84620.9 |
| deoxyribose-phosphate aldolase | HSERO_RS05120 | Not Available | Negative | 1132326 - 1133357 | 37327.2 |
| deor/glpr family dna-binding transcription regulator | HSERO_RS05125 | Not Available | Positive | 1133620 - 1134435 | 29067.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


