Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta hydrolase family protein | HSERO_RS05030 | Not Available | Positive | 1112013 - 1113173 | 43612.0 |
| voc family protein | HSERO_RS05035 | Not Available | Positive | 1113202 - 1114128 | 34047.4 |
| rieske (2fe-2s) protein | HSERO_RS05040 | Not Available | Positive | 1114173 - 1114511 | 12082.2 |
| fad-dependent oxidoreductase | HSERO_RS05045 | Not Available | Positive | 1114544 - 1115674 | 41109.9 |
| mfs transporter | HSERO_RS05050 | Not Available | Positive | 1115752 - 1116906 | 39742.7 |
| cyclase family protein | HSERO_RS05055 | Not Available | Positive | 1116903 - 1117718 | 30052.5 |
| cupin domain-containing protein | HSERO_RS05060 | Not Available | Positive | 1117742 - 1118332 | 21088.0 |
| fumarylacetoacetate hydrolase family protein | HSERO_RS05065 | Not Available | Positive | 1118336 - 1119319 | 35632.5 |
| nad-dependent epimerase/dehydratase family protein | HSERO_RS05070 | Not Available | Positive | 1119316 - 1120278 | 34017.3 |
| ggdef domain-containing protein | HSERO_RS05075 | Not Available | Positive | 1121432 - 1122436 | 37672.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


