Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methionine abc transporter atp-binding protein | HSERO_RS04980 | Not Available | Negative | 1095183 - 1096220 | 38006.1 |
| porin | HSERO_RS04985 | Not Available | Positive | 1096792 - 1098009 | 42042.7 |
| chaperonin groel | HSERO_RS04990 | Not Available | Negative | 1098311 - 1099960 | 57560.5 |
| co-chaperone groes | HSERO_RS04995 | Not Available | Negative | 1100085 - 1100375 | 10539.8 |
| phage tail protein | HSERO_RS05000 | Not Available | Positive | 1101299 - 1102144 | 27909.2 |
| tetratricopeptide repeat protein | HSERO_RS05005 | Not Available | Positive | 1102203 - 1103180 | 35239.9 |
| ydg domain-containing protein | HSERO_RS05010 | Not Available | Positive | 1103337 - 1108043 | 155018.0 |
| shlb/fhac/hecb family hemolysin secretion/activation protein | HSERO_RS05015 | Not Available | Positive | 1108052 - 1109749 | 60284.6 |
| lysr family transcriptional regulator | HSERO_RS05020 | Not Available | Negative | 1109847 - 1110776 | 34754.2 |
| spha family protein | HSERO_RS05025 | Not Available | Positive | 1111119 - 1111982 | 30777.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


