Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yaeq family protein | HSERO_RS04930 | Not Available | Positive | 1083627 - 1084169 | 20169.1 |
| phosphotransferase enzyme family protein | HSERO_RS04935 | Not Available | Negative | 1084227 - 1085399 | 43129.0 |
| tonb-dependent siderophore receptor | HSERO_RS04940 | Not Available | Negative | 1085404 - 1087575 | 78158.7 |
| lytic murein transglycosylase b | HSERO_RS04945 | Not Available | Negative | 1087653 - 1088792 | 41858.8 |
| histone deacetylase family protein | HSERO_RS04950 | Not Available | Positive | 1089009 - 1089950 | 34450.7 |
| lysr family transcriptional regulator | HSERO_RS04955 | Not Available | Negative | 1089969 - 1090835 | 31730.4 |
| mfs transporter | HSERO_RS04960 | Not Available | Positive | 1091048 - 1092484 | 49612.2 |
| ribosome biogenesis gtpase ylqf | HSERO_RS04965 | Not Available | Positive | 1092625 - 1093587 | 35613.8 |
| metq/nlpa family abc transporter substrate-binding protein | HSERO_RS04970 | Not Available | Negative | 1093677 - 1094474 | 28574.7 |
| methionine abc transporter permease | HSERO_RS04975 | Not Available | Negative | 1094540 - 1095193 | 22744.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


