Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf6516 family protein | HSERO_RS00030 | Not Available | Positive | 11214 - 12347 | 42670.4 |
| aspartate aminotransferase family protein | HSERO_RS00035 | Not Available | Negative | 12433 - 13761 | 47499.1 |
| phosphotransferase enzyme family protein | HSERO_RS00040 | Not Available | Positive | 13986 - 14987 | 37919.9 |
| arac family transcriptional regulator | HSERO_RS00045 | Not Available | Positive | 15047 - 16108 | 39328.1 |
| citrate-proton symporter | HSERO_RS00050 | Not Available | Positive | 16312 - 17625 | 47154.7 |
| amidase | HSERO_RS00055 | Not Available | Positive | 17667 - 19115 | 52615.0 |
| hypothetical protein | HSERO_RS00060 | Not Available | Positive | 19478 - 20413 | 34501.6 |
| putative bifunctional diguanylate cyclase/phosphodiesterase | HSERO_RS00065 | Not Available | Positive | 20451 - 22787 | 86881.1 |
| duf4148 domain-containing protein | HSERO_RS00070 | Not Available | Negative | 22849 - 23139 | 9883.64 |
| heavy metal response regulator transcription factor | HSERO_RS00075 | Not Available | Positive | 23342 - 24049 | 27267.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


