Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trove domain-containing protein | AMED_RS04825 | Not Available | Negative | 1003163 - 1004743 | 57768.4 |
| llm class flavin-dependent oxidoreductase | AMED_RS04830 | Not Available | Positive | 1005212 - 1006105 | 31249.2 |
| marr family winged helix-turn-helix transcriptional regulator | AMED_RS04835 | Not Available | Positive | 1006115 - 1006573 | 16235.5 |
| acyl-coa carboxylase subunit epsilon | AMED_RS04840 | Not Available | Negative | 1006564 - 1006788 | 7822.21 |
| acyl-coa carboxylase subunit beta | AMED_RS04845 | Not Available | Negative | 1006785 - 1008422 | 58877.4 |
| gnat family n-acetyltransferase | AMED_RS04850 | Not Available | Positive | 1008478 - 1009272 | 28034.4 |
| response regulator transcription factor | AMED_RS04855 | Not Available | Negative | 1009256 - 1009906 | 23203.2 |
| sensor histidine kinase | AMED_RS04860 | Not Available | Negative | 1009903 - 1011009 | 38267.6 |
| srpbcc family protein | AMED_RS04865 | Not Available | Negative | 1011044 - 1011841 | 29704.8 |
| marr family winged helix-turn-helix transcriptional regulator | AMED_RS04870 | Not Available | Negative | 1011896 - 1012312 | 14997.0 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
