Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1707 domain-containing protein | AMED_RS04775 | Not Available | Negative | 992498 - 992893 | 13965.2 |
| duf1707 domain-containing protein | AMED_RS04780 | Not Available | Negative | 992901 - 993437 | 19975.7 |
| acetyl/propionyl/methylcrotonyl-coa carboxylase subunit alpha | AMED_RS04785 | Not Available | Negative | 993496 - 995295 | 63562.6 |
| sav_915 family protein | AMED_RS04790 | Not Available | Negative | 995402 - 995677 | 9886.75 |
| hypothetical protein | AMED_RS04795 | Not Available | Positive | 995857 - 996579 | 24539.4 |
| dicarboxylate/amino acid:cation symporter | AMED_RS04800 | Not Available | Negative | 996677 - 998029 | 46833.4 |
| nucleoside triphosphate pyrophosphatase | AMED_RS04805 | Not Available | Negative | 998130 - 998759 | 21308.4 |
| glycoside hydrolase family 3 protein | AMED_RS04810 | Not Available | Positive | 998878 - 1000731 | 65108.1 |
| dha2 family efflux mfs transporter permease subunit | AMED_RS04815 | Not Available | Negative | 1000804 - 1002417 | 55648.1 |
| padr family transcriptional regulator | AMED_RS04820 | Not Available | Negative | 1002398 - 1003024 | 23990.6 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
