Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AMED_RS04725 | Not Available | Positive | 982632 - 983150 | 16862.5 |
| class f sortase | AMED_RS04730 | Not Available | Positive | 983251 - 983898 | 22421.9 |
| voc family protein | AMED_RS04735 | Not Available | Positive | 983979 - 984782 | 28512.4 |
| glycerol kinase glpk | AMED_RS04740 | Not Available | Negative | 984831 - 986345 | 55061.0 |
| mip/aquaporin family protein | AMED_RS04745 | Not Available | Negative | 986380 - 987129 | 25971.6 |
| glycerol-3-phosphate dehydrogenase/oxidase | AMED_RS04750 | Not Available | Positive | 987389 - 989122 | 62902.9 |
| tetr family transcriptional regulator | AMED_RS04755 | Not Available | Negative | 989158 - 989745 | 21551.6 |
| sdr family oxidoreductase | AMED_RS04760 | Not Available | Positive | 989865 - 990758 | 30115.3 |
| gnat family n-acetyltransferase | AMED_RS04765 | Not Available | Negative | 990806 - 991336 | 19627.2 |
| hypothetical protein | AMED_RS04770 | Not Available | Negative | 991396 - 992421 | 35164.1 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
