Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thioredoxin | AMED_RS47810 | Not Available | Positive | 10224655 - 10224978 | 11598.1 |
| n-acetylmuramoyl-l-alanine amidase | AMED_RS47815 | Not Available | Positive | 10225261 - 10226409 | 41649.7 |
| gnat family n-acetyltransferase | AMED_RS47820 | Not Available | Negative | 10226621 - 10227265 | 23450.2 |
| plp-dependent aminotransferase family protein | AMED_RS47825 | Not Available | Positive | 10227478 - 10228815 | 48612.2 |
| d-alanine--d-alanine ligase | AMED_RS47830 | Not Available | Positive | 10228903 - 10229847 | 32876.2 |
| parb/repb/spo0j family partition protein | AMED_RS47835 | Not Available | Negative | 10229981 - 10230982 | 36170.3 |
| para family protein | AMED_RS47840 | Not Available | Negative | 10230979 - 10231926 | 33692.2 |
| 16s rrna (guanine(527)-n(7))-methyltransferase rsmg | AMED_RS47845 | Not Available | Negative | 10231983 - 10232666 | 24247.6 |
| duf6886 family protein | AMED_RS47850 | Not Available | Negative | 10232812 - 10233354 | 19595.5 |
| r3h domain-containing nucleic acid-binding protein | AMED_RS47855 | Not Available | Negative | 10233429 - 10233983 | 20008.2 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
