Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cca trna nucleotidyltransferase | AMED_RS47760 | Not Available | Negative | 10213417 - 10214853 | 52912.3 |
| nudix hydrolase | AMED_RS47765 | Not Available | Positive | 10214955 - 10215509 | 20834.9 |
| duf6049 family protein | AMED_RS47770 | Not Available | Positive | 10215506 - 10217662 | 73460.0 |
| hypothetical protein | AMED_RS47775 | Not Available | Negative | 10217865 - 10218152 | 9614.86 |
| hypothetical protein | AMED_RS47780 | Not Available | Negative | 10218302 - 10218517 | 6266.23 |
| murein biosynthesis integral membrane protein murj | AMED_RS47785 | Not Available | Positive | 10218525 - 10220411 | 66910.6 |
| protein kinase family protein | AMED_RS47790 | Not Available | Positive | 10220491 - 10222086 | 55423.5 |
| rna polymerase sigma factor sigm | AMED_RS47795 | Not Available | Positive | 10222118 - 10222741 | 22570.8 |
| hypothetical protein | AMED_RS47800 | Not Available | Positive | 10222738 - 10223547 | 26884.1 |
| thioredoxin-disulfide reductase | AMED_RS47805 | Not Available | Positive | 10223627 - 10224619 | 35341.6 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
