Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ybab/ebfc family nucleoid-associated protein | AMED_RS47710 | Not Available | Positive | 10194183 - 10194716 | 19044.4 |
| wxg100 family type vii secretion target | AMED_RS47715 | Not Available | Positive | 10194716 - 10195039 | 10760.4 |
| toxin glutamine deamidase domain-containing protein | AMED_RS49355 | Not Available | Positive | 10195055 - 10202137 | 251897.0 |
| hypothetical protein | AMED_RS47725 | Not Available | Positive | 10202137 - 10202586 | 16804.7 |
| glycohydrolase toxin tnt-related protein | AMED_RS47730 | Not Available | Positive | 10202652 - 10203998 | 50099.0 |
| adp-ribosylglycohydrolase family protein | AMED_RS47735 | Not Available | Positive | 10203999 - 10206242 | 82176.5 |
| adp-ribosylglycohydrolase family protein | AMED_RS47740 | Not Available | Positive | 10206259 - 10209315 | 108666.0 |
| tnt domain-containing protein | AMED_RS47745 | Not Available | Positive | 10209348 - 10211255 | 69723.6 |
| class i sam-dependent methyltransferase | AMED_RS47750 | Not Available | Negative | 10211242 - 10212093 | 30592.7 |
| sensor histidine kinase | AMED_RS47755 | Not Available | Negative | 10212106 - 10213413 | 46292.4 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
