Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| esx secretion-associated protein espg | AMED_RS47660 | Not Available | Positive | 10183891 - 10184634 | 26884.3 |
| hypothetical protein | AMED_RS47665 | Not Available | Positive | 10184631 - 10185032 | 14193.8 |
| duf3558 domain-containing protein | AMED_RS47670 | Not Available | Positive | 10185083 - 10185652 | 18922.1 |
| tetr/acrr family transcriptional regulator | AMED_RS47675 | Not Available | Positive | 10185725 - 10186462 | 27050.4 |
| sdr family oxidoreductase | AMED_RS47680 | Not Available | Negative | 10186459 - 10187196 | 24461.0 |
| leucine--trna ligase | AMED_RS47685 | Not Available | Negative | 10187287 - 10190127 | 106159.0 |
| esterase-like activity of phytase family protein | AMED_RS47690 | Not Available | Negative | 10190321 - 10191481 | 41230.1 |
| sdpi family protein | AMED_RS47695 | Not Available | Positive | 10191548 - 10191967 | 13459.8 |
| yqge/algh family protein | AMED_RS47700 | Not Available | Negative | 10191964 - 10192587 | 21929.1 |
| mfs transporter | AMED_RS47705 | Not Available | Positive | 10192748 - 10194040 | 44312.8 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
