Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| marr family winged helix-turn-helix transcriptional regulator | AMED_RS47560 | Not Available | Negative | 10161641 - 10162093 | 16593.7 |
| marr family winged helix-turn-helix transcriptional regulator | AMED_RS47565 | Not Available | Positive | 10162160 - 10162552 | 14603.2 |
| dioxygenase | AMED_RS47570 | Not Available | Positive | 10162620 - 10163390 | 28060.3 |
| pe-pgrs family protein | AMED_RS47575 | Not Available | Negative | 10163625 - 10166921 | 105554.0 |
| hypothetical protein | AMED_RS47580 | Not Available | Negative | 10167128 - 10168126 | 33195.7 |
| ai-2e family transporter | AMED_RS47585 | Not Available | Positive | 10168352 - 10169554 | 42107.5 |
| macs family sensor histidine kinase | AMED_RS47590 | Not Available | Positive | 10169551 - 10170687 | 40148.4 |
| response regulator transcription factor | AMED_RS47595 | Not Available | Positive | 10170684 - 10171352 | 23855.3 |
| hypothetical protein | AMED_RS47600 | Not Available | Negative | 10171357 - 10172322 | 33912.7 |
| duf1707 domain-containing protein | AMED_RS47605 | Not Available | Positive | 10172449 - 10173111 | 23929.3 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
