Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| serine/threonine-protein kinase | AMED_RS04675 | Not Available | Negative | 970117 - 971859 | 61120.1 |
| methylmalonyl-coa mutase family protein | AMED_RS04680 | Not Available | Positive | 972012 - 973847 | 63527.9 |
| methylmalonyl-coa mutase | AMED_RS04685 | Not Available | Positive | 973844 - 976012 | 77990.6 |
| methylmalonyl co-a mutase-associated gtpase meab | AMED_RS04690 | Not Available | Positive | 976016 - 976999 | 34981.0 |
| hypothetical protein | AMED_RS04695 | Not Available | Positive | 977049 - 977351 | 10309.0 |
| amidohydrolase | AMED_RS04700 | Not Available | Positive | 977549 - 978850 | 45346.3 |
| hypothetical protein | AMED_RS04705 | Not Available | Positive | 979069 - 979902 | 30858.1 |
| gamma-glutamylcyclotransferase | AMED_RS04710 | Not Available | Negative | 979973 - 980425 | 16133.1 |
| nad(p)h-quinone dehydrogenase | AMED_RS04715 | Not Available | Positive | 980552 - 981952 | 48882.1 |
| hypothetical protein | AMED_RS04720 | Not Available | Positive | 982025 - 982492 | 15404.2 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
