Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AMED_RS47510 | Not Available | Positive | 10153727 - 10154629 | 28998.9 |
| 30s ribosomal protein s6 | AMED_RS47515 | Not Available | Positive | 10154746 - 10155072 | 12182.8 |
| single-stranded dna-binding protein | AMED_RS47520 | Not Available | Positive | 10155090 - 10155605 | 17487.3 |
| 30s ribosomal protein s18 | AMED_RS47525 | Not Available | Positive | 10155649 - 10155897 | 9458.74 |
| 50s ribosomal protein l9 | AMED_RS47530 | Not Available | Positive | 10155912 - 10156376 | 16485.1 |
| hypothetical protein | AMED_RS47535 | Not Available | Positive | 10156503 - 10156859 | 12748.8 |
| duf3558 domain-containing protein | AMED_RS47540 | Not Available | Positive | 10156856 - 10157455 | 20222.4 |
| hypothetical protein | AMED_RS47545 | Not Available | Positive | 10157457 - 10158791 | 43736.3 |
| esx secretion-associated protein espg | AMED_RS47550 | Not Available | Positive | 10158924 - 10159715 | 28808.1 |
| replicative dna helicase | AMED_RS47555 | Not Available | Positive | 10160235 - 10161644 | 51369.0 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
