Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| padr family transcriptional regulator | AMED_RS47460 | Not Available | Negative | 10140667 - 10141212 | 21222.3 |
| duf5318 domain-containing protein | AMED_RS47465 | Not Available | Positive | 10141457 - 10141852 | 14608.4 |
| transglycosylase domain-containing protein | AMED_RS47470 | Not Available | Positive | 10142101 - 10144596 | 89001.7 |
| transglycosylase domain-containing protein | AMED_RS47475 | Not Available | Positive | 10144721 - 10147075 | 84493.5 |
| gfo/idh/moca family oxidoreductase | AMED_RS47480 | Not Available | Negative | 10147151 - 10148197 | 37265.0 |
| rok family transcriptional regulator | AMED_RS47485 | Not Available | Positive | 10148253 - 10149311 | 37456.9 |
| glycosyltransferase family 87 protein | AMED_RS47490 | Not Available | Positive | 10149360 - 10150910 | 57264.1 |
| deoxyribonuclease iv | AMED_RS47495 | Not Available | Negative | 10150921 - 10151694 | 27606.6 |
| hypothetical protein | AMED_RS47500 | Not Available | Positive | 10151806 - 10152618 | 26145.7 |
| hypothetical protein | AMED_RS47505 | Not Available | Positive | 10152802 - 10153641 | 27272.5 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
