Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amidohydrolase family protein | AMED_RS47410 | Not Available | Positive | 10129914 - 10131221 | 45567.6 |
| sdr family oxidoreductase | AMED_RS47415 | Not Available | Negative | 10131218 - 10131895 | 23535.0 |
| sdrd b-like domain-containing protein | AMED_RS47420 | Not Available | Negative | 10131909 - 10133579 | 57484.8 |
| phox family phosphatase | AMED_RS47425 | Not Available | Negative | 10133651 - 10135717 | 73885.1 |
| mfs transporter | AMED_RS47430 | Not Available | Negative | 10135826 - 10137043 | 41284.4 |
| marr family winged helix-turn-helix transcriptional regulator | AMED_RS47435 | Not Available | Negative | 10137033 - 10137491 | 17020.7 |
| had family phosphatase | AMED_RS47440 | Not Available | Positive | 10137558 - 10138196 | 22340.8 |
| hypothetical protein | AMED_RS47445 | Not Available | Negative | 10138189 - 10138887 | 24837.5 |
| rna polymerase sigma factor | AMED_RS47450 | Not Available | Negative | 10138884 - 10139414 | 19968.8 |
| inositol-3-phosphate synthase | AMED_RS47455 | Not Available | Negative | 10139506 - 10140594 | 39759.1 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
