Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | AMED_RS47360 | Not Available | Positive | 10119747 - 10120661 | 32780.3 |
| abc transporter permease | AMED_RS47365 | Not Available | Positive | 10120658 - 10121413 | 26219.5 |
| hypothetical protein | AMED_RS47370 | Not Available | Positive | 10121573 - 10122142 | 20794.7 |
| trna (guanosine(46)-n7)-methyltransferase trmb | AMED_RS47375 | Not Available | Positive | 10122205 - 10122900 | 26119.2 |
| abc transporter permease | AMED_RS47380 | Not Available | Negative | 10123009 - 10125258 | 77570.8 |
| abc transporter atp-binding protein | AMED_RS47385 | Not Available | Negative | 10125255 - 10125956 | 24741.8 |
| sensor histidine kinase | AMED_RS47390 | Not Available | Positive | 10126130 - 10127929 | 63059.2 |
| response regulator transcription factor | AMED_RS47395 | Not Available | Positive | 10127926 - 10128579 | 23324.2 |
| phage holin family protein | AMED_RS47400 | Not Available | Negative | 10128576 - 10128920 | 11946.6 |
| hypothetical protein | AMED_RS47405 | Not Available | Positive | 10129664 - 10129855 | 6869.19 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
