Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dynamin family protein | AMED_RS47310 | Not Available | Negative | 10109621 - 10111459 | 66499.4 |
| nucleotide exchange factor grpe | AMED_RS47315 | Not Available | Negative | 10111456 - 10111914 | 16165.9 |
| hypothetical protein | AMED_RS47320 | Not Available | Negative | 10112001 - 10112648 | 23816.3 |
| dynamin family protein | AMED_RS47325 | Not Available | Negative | 10112708 - 10114312 | 56226.1 |
| sensor histidine kinase | AMED_RS47330 | Not Available | Positive | 10114428 - 10115585 | 40654.4 |
| response regulator transcription factor | AMED_RS47335 | Not Available | Positive | 10115582 - 10116238 | 23441.6 |
| sdr family nad(p)-dependent oxidoreductase | AMED_RS47340 | Not Available | Negative | 10116240 - 10117151 | 32771.8 |
| tetr/acrr family transcriptional regulator | AMED_RS47345 | Not Available | Negative | 10117148 - 10117735 | 20610.4 |
| abc transporter atp-binding protein | AMED_RS47350 | Not Available | Positive | 10117933 - 10118871 | 33186.9 |
| abc transporter permease | AMED_RS47355 | Not Available | Positive | 10118889 - 10119638 | 26072.4 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
