Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta hydrolase | AMED_RS47260 | Not Available | Positive | 10099517 - 10101136 | 57881.4 |
| helix-turn-helix domain-containing protein | AMED_RS47265 | Not Available | Positive | 10101253 - 10101525 | 9414.28 |
| gnat family n-acetyltransferase | AMED_RS47270 | Not Available | Positive | 10101535 - 10102350 | 29248.8 |
| endou domain-containing protein | AMED_RS47275 | Not Available | Negative | 10102347 - 10102925 | 21310.9 |
| hypothetical protein | AMED_RS47280 | Not Available | Negative | 10102957 - 10104237 | 44284.2 |
| abc transporter atp-binding protein | AMED_RS47285 | Not Available | Negative | 10104231 - 10104836 | 22084.5 |
| tigr03621 family f420-dependent llm class oxidoreductase | AMED_RS47290 | Not Available | Negative | 10104833 - 10105708 | 31494.6 |
| tigr03621 family f420-dependent llm class oxidoreductase | AMED_RS47295 | Not Available | Negative | 10105723 - 10106565 | 30394.5 |
| phosphoenolpyruvate carboxykinase (gtp) | AMED_RS47300 | Not Available | Negative | 10106641 - 10108464 | 67644.9 |
| hypothetical protein | AMED_RS47305 | Not Available | Negative | 10108815 - 10109519 | 24121.1 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
