Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| doxx family membrane protein | AMED_RS47215 | Not Available | Negative | 10091334 - 10091879 | 19080.3 |
| tipas antibiotic-recognition domain-containing protein | AMED_RS47220 | Not Available | Positive | 10092051 - 10092785 | 27349.0 |
| hypothetical protein | AMED_RS47225 | Not Available | Negative | 10092847 - 10093335 | 17785.0 |
| atp-binding protein | AMED_RS47230 | Not Available | Positive | 10093445 - 10094635 | 42882.1 |
| hypothetical protein | AMED_RS48195 | Not Available | Positive | 10094883 - 10095044 | 5982.39 |
| helix-turn-helix domain-containing gnat family n-acetyltransferase | AMED_RS47235 | Not Available | Positive | 10095268 - 10096197 | 34651.1 |
| peroxidase-related enzyme | AMED_RS47240 | Not Available | Negative | 10096194 - 10096766 | 20876.8 |
| hypothetical protein | AMED_RS47245 | Not Available | Positive | 10096799 - 10097401 | 21471.4 |
| monocarboxylate uptake permease mctp | AMED_RS47250 | Not Available | Negative | 10097398 - 10099053 | 59021.2 |
| duf3311 domain-containing protein | AMED_RS47255 | Not Available | Negative | 10099050 - 10099328 | 10552.0 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
