Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dead/deah box helicase | AMED_RS47165 | Not Available | Negative | 10079673 - 10081499 | 66776.4 |
| hypothetical protein | AMED_RS47170 | Not Available | Negative | 10081500 - 10082909 | 52839.8 |
| hypothetical protein | AMED_RS47175 | Not Available | Negative | 10082972 - 10083616 | 23818.4 |
| hypothetical protein | AMED_RS47180 | Not Available | Positive | 10084576 - 10084923 | 12322.2 |
| scp2 sterol-binding domain-containing protein | AMED_RS47185 | Not Available | Negative | 10085670 - 10086224 | 20396.1 |
| scp2 sterol-binding domain-containing protein | AMED_RS47190 | Not Available | Negative | 10086286 - 10086942 | 23800.6 |
| tetr/acrr family transcriptional regulator | AMED_RS47195 | Not Available | Positive | 10087069 - 10087725 | 24037.6 |
| maoc/paaz c-terminal domain-containing protein | AMED_RS47200 | Not Available | Negative | 10087717 - 10088559 | 30850.1 |
| 3-oxoacyl-acp reductase | AMED_RS47205 | Not Available | Negative | 10088561 - 10089895 | 46031.3 |
| acetyl-coa c-acetyltransferase | AMED_RS47210 | Not Available | Positive | 10089989 - 10091278 | 45110.2 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
