Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-ketoacid dehydrogenase subunit beta | AMED_RS47115 | Not Available | Positive | 10070730 - 10071722 | 35671.9 |
| dihydrolipoamide acetyltransferase family protein | AMED_RS47120 | Not Available | Positive | 10071739 - 10073028 | 45300.6 |
| tetr/acrr family transcriptional regulator | AMED_RS47125 | Not Available | Positive | 10073176 - 10073766 | 21377.8 |
| abc transporter atp-binding protein | AMED_RS47130 | Not Available | Positive | 10073787 - 10075733 | 71290.9 |
| zinc-binding dehydrogenase | AMED_RS47135 | Not Available | Negative | 10075730 - 10076398 | 22657.1 |
| alcohol dehydrogenase catalytic domain-containing protein | AMED_RS47140 | Not Available | Negative | 10076329 - 10076637 | 10786.8 |
| tetr/acrr family transcriptional regulator | AMED_RS47145 | Not Available | Positive | 10076718 - 10077269 | 19626.7 |
| fxsa family protein | AMED_RS47150 | Not Available | Positive | 10077317 - 10077784 | 16643.8 |
| very short patch repair endonuclease | AMED_RS47155 | Not Available | Negative | 10077861 - 10078319 | 17674.3 |
| dna cytosine methyltransferase | AMED_RS47160 | Not Available | Positive | 10078373 - 10079680 | 47924.0 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
