Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid abc transporter atp-binding protein | AMED_RS47065 | Not Available | Negative | 10059794 - 10060567 | 28534.0 |
| amino acid abc transporter permease | AMED_RS47070 | Not Available | Negative | 10060564 - 10061511 | 34249.5 |
| abc transporter substrate-binding protein | AMED_RS47075 | Not Available | Negative | 10061529 - 10062428 | 30426.1 |
| circularly permuted type 2 atp-grasp protein | AMED_RS47080 | Not Available | Positive | 10062610 - 10064268 | 61087.9 |
| alpha-e domain-containing protein | AMED_RS47085 | Not Available | Positive | 10064319 - 10065266 | 35084.6 |
| transglutaminase family protein | AMED_RS47090 | Not Available | Positive | 10065263 - 10066105 | 31242.6 |
| membrane protein | AMED_RS47095 | Not Available | Negative | 10066102 - 10067106 | 34262.1 |
| tetr/acrr family transcriptional regulator | AMED_RS47100 | Not Available | Positive | 10067189 - 10067749 | 20314.0 |
| m20/m25/m40 family metallo-hydrolase | AMED_RS47105 | Not Available | Negative | 10067746 - 10069164 | 50241.5 |
| pyruvate dehydrogenase (acetyl-transferring) e1 component subunit alpha | AMED_RS47110 | Not Available | Positive | 10069525 - 10070730 | 44524.6 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
