Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mab_1171c family putative transporter | AMED_RS04625 | Not Available | Negative | 961446 - 962570 | 39820.2 |
| hypothetical protein | AMED_RS04630 | Not Available | Negative | 962567 - 963088 | 19824.6 |
| helix-turn-helix transcriptional regulator | AMED_RS04635 | Not Available | Negative | 963085 - 963513 | 15585.5 |
| flavodoxin family protein | AMED_RS04640 | Not Available | Negative | 963803 - 964261 | 15979.0 |
| phospho-sugar mutase | AMED_RS04645 | Not Available | Negative | 964261 - 965895 | 56586.1 |
| nucleotide disphospho-sugar-binding domain-containing protein | AMED_RS04650 | Not Available | Positive | 965926 - 967089 | 39867.1 |
| purine-nucleoside phosphorylase | AMED_RS04655 | Not Available | Negative | 967229 - 968008 | 27095.7 |
| aba4-like family protein | AMED_RS04660 | Not Available | Negative | 968005 - 968424 | 15861.1 |
| hypothetical protein | AMED_RS04665 | Not Available | Negative | 968421 - 969380 | 33778.1 |
| merr family transcriptional regulator | AMED_RS04670 | Not Available | Positive | 969500 - 970120 | 21991.7 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
