Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glsb/yeaq/ymge family stress response membrane protein | AMED_RS47015 | Not Available | Positive | 10048110 - 10048385 | 9280.78 |
| mfs transporter | AMED_RS47020 | Not Available | Negative | 10048444 - 10049859 | 48025.1 |
| helix-turn-helix transcriptional regulator | AMED_RS47025 | Not Available | Positive | 10050031 - 10050870 | 31829.2 |
| leucine-rich repeat domain-containing protein | AMED_RS47030 | Not Available | Positive | 10050867 - 10051574 | 26150.5 |
| vanw family protein | AMED_RS47035 | Not Available | Negative | 10051579 - 10053654 | 70675.5 |
| co-chaperone groes | AMED_RS47040 | Not Available | Negative | 10053848 - 10054180 | 12136.5 |
| nhl domain-containing thioredoxin family protein | AMED_RS47045 | Not Available | Negative | 10054182 - 10055999 | 64179.9 |
| hypothetical protein | AMED_RS47050 | Not Available | Positive | 10056165 - 10056740 | 21702.6 |
| srpbcc family protein | AMED_RS47055 | Not Available | Negative | 10056730 - 10057200 | 17100.0 |
| oxidoreductase | AMED_RS47060 | Not Available | Negative | 10057407 - 10059710 | 84298.6 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
