Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gnat family n-acetyltransferase | AMED_RS46970 | Not Available | Positive | 10038690 - 10039226 | 20468.7 |
| mmcq/yjbr family dna-binding protein | AMED_RS46975 | Not Available | Negative | 10039216 - 10039542 | 11990.3 |
| bifunctional udp-sugar hydrolase/5'-nucleotidase | AMED_RS46980 | Not Available | Negative | 10039581 - 10041272 | 58427.0 |
| alpha/beta fold hydrolase | AMED_RS46985 | Not Available | Negative | 10041389 - 10042168 | 27629.5 |
| gfo/idh/moca family protein | AMED_RS46990 | Not Available | Negative | 10042207 - 10043286 | 37586.8 |
| vanz family protein | AMED_RS46995 | Not Available | Positive | 10043506 - 10044132 | 23022.6 |
| hypothetical protein | AMED_RS48190 | Not Available | Negative | 10044073 - 10044249 | 6290.04 |
| g/u mismatch-specific dna glycosylase | AMED_RS47000 | Not Available | Positive | 10044367 - 10044927 | 20489.4 |
| response regulator transcription factor | AMED_RS47005 | Not Available | Positive | 10045192 - 10045977 | 28009.9 |
| acyl-coa dehydrogenase | AMED_RS47010 | Not Available | Positive | 10046137 - 10047972 | 66939.1 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
