Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dctp deaminase | AMED_RS46925 | Not Available | Negative | 10032121 - 10032702 | 21435.4 |
| oxygenase mpab family protein | AMED_RS46930 | Not Available | Negative | 10032788 - 10033984 | 44165.0 |
| Trna-gly | Not Available | Not Available | Positive | 10034092 - 10034162 | Not Available |
| nuclear transport factor 2 family protein | AMED_RS46940 | Not Available | Negative | 10034214 - 10034606 | 14326.5 |
| rna polymerase sigma factor | AMED_RS46945 | Not Available | Negative | 10034697 - 10035884 | 42490.3 |
| ycii family protein | AMED_RS46950 | Not Available | Negative | 10035881 - 10036231 | 12200.3 |
| cytochrome p450 | AMED_RS49350 | Not Available | Positive | 10036350 - 10036712 | 13203.7 |
| cytochrome p450 | AMED_RS46955 | Not Available | Positive | 10036624 - 10037568 | 34290.9 |
| hypothetical protein | AMED_RS46960 | Not Available | Negative | 10037565 - 10038215 | 24044.6 |
| nitroreductase family deazaflavin-dependent oxidoreductase | AMED_RS46965 | Not Available | Positive | 10038304 - 10038681 | 14249.4 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
