Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dienelactone hydrolase family protein | AMED_RS46825 | Not Available | Positive | 10009933 - 10010649 | 25508.3 |
| lytic polysaccharide monooxygenase | AMED_RS46830 | Not Available | Positive | 10010796 - 10011545 | 25966.4 |
| duf305 domain-containing protein | AMED_RS46835 | Not Available | Positive | 10011542 - 10012066 | 18705.5 |
| heat shock protein transcriptional repressor hspr | AMED_RS46840 | Not Available | Negative | 10012249 - 10012674 | 15611.7 |
| molecular chaperone dnaj | AMED_RS46845 | Not Available | Negative | 10012680 - 10013855 | 40732.1 |
| nucleotide exchange factor grpe | AMED_RS46850 | Not Available | Negative | 10013892 - 10014599 | 25164.1 |
| molecular chaperone dnak | AMED_RS46855 | Not Available | Negative | 10014596 - 10016470 | 66592.4 |
| duf4097 family beta strand repeat-containing protein | AMED_RS46860 | Not Available | Negative | 10017163 - 10017933 | 26338.6 |
| ybhb/ybcl family raf kinase inhibitor-like protein | AMED_RS46865 | Not Available | Positive | 10018108 - 10018641 | 18506.5 |
| helix-turn-helix transcriptional regulator | AMED_RS46870 | Not Available | Positive | 10018722 - 10019561 | 30949.2 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
