Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ftsx-like permease family protein | AMED_RS46775 | Not Available | Negative | 9996352 - 9998799 | 83424.9 |
| abc transporter atp-binding protein | AMED_RS46780 | Not Available | Negative | 9998799 - 9999560 | 27014.5 |
| sdr family oxidoreductase | AMED_RS46785 | Not Available | Negative | 9999636 - 10000403 | 26881.5 |
| hypothetical protein | AMED_RS46790 | Not Available | Positive | 10000473 - 10001426 | 32675.0 |
| hypothetical protein | AMED_RS46795 | Not Available | Negative | 10001423 - 10002268 | 29575.7 |
| atp-dependent chaperone clpb | AMED_RS46800 | Not Available | Negative | 10002431 - 10005028 | 93951.0 |
| mfs transporter | AMED_RS46805 | Not Available | Negative | 10005127 - 10006314 | 40697.9 |
| marr family winged helix-turn-helix transcriptional regulator | AMED_RS46810 | Not Available | Negative | 10006415 - 10006900 | 17874.1 |
| globin domain-containing protein | AMED_RS46815 | Not Available | Positive | 10007223 - 10008398 | 43245.7 |
| globin domain-containing protein | AMED_RS46820 | Not Available | Positive | 10008755 - 10009858 | 40638.0 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
