Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| laci family dna-binding transcriptional regulator | AMED_RS46725 | Not Available | Positive | 9987898 - 9988764 | 30934.3 |
| glycoside hydrolase family 76 protein | AMED_RS46730 | Not Available | Negative | 9988766 - 9989770 | 36189.9 |
| molybdopterin-dependent oxidoreductase | AMED_RS46735 | Not Available | Positive | 9989822 - 9991966 | 76433.4 |
| cellulase family glycosylhydrolase | AMED_RS46740 | Not Available | Positive | 9992125 - 9993111 | 35412.1 |
| duf2784 domain-containing protein | AMED_RS46745 | Not Available | Negative | 9993123 - 9993518 | 14521.8 |
| hypothetical protein | AMED_RS46750 | Not Available | Negative | 9993832 - 9994164 | 11468.9 |
| asp23/gls24 family envelope stress response protein | AMED_RS46755 | Not Available | Negative | 9994161 - 9994532 | 12953.5 |
| asp23/gls24 family envelope stress response protein | AMED_RS46760 | Not Available | Negative | 9994529 - 9995107 | 20344.2 |
| rna polymerase sigma factor | AMED_RS46765 | Not Available | Negative | 9995104 - 9995655 | 20466.6 |
| orotate phosphoribosyltransferase | AMED_RS46770 | Not Available | Negative | 9995761 - 9996324 | 19828.8 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
