Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| deda family protein | AMED_RS46675 | Not Available | Positive | 9979183 - 9979857 | 24392.2 |
| voc family protein | AMED_RS46680 | Not Available | Negative | 9979987 - 9980400 | 15629.5 |
| isopenicillin n synthase family oxygenase | AMED_RS46685 | Not Available | Negative | 9980581 - 9981582 | 37220.3 |
| sdr family oxidoreductase | AMED_RS46690 | Not Available | Negative | 9981654 - 9982394 | 25084.8 |
| nucleoside/nucleotide kinase family protein | AMED_RS46695 | Not Available | Negative | 9982391 - 9983026 | 23393.0 |
| pfkb family carbohydrate kinase | AMED_RS46700 | Not Available | Negative | 9983023 - 9983850 | 28361.5 |
| atp-binding cassette domain-containing protein | AMED_RS46705 | Not Available | Negative | 9983853 - 9984662 | 28610.8 |
| abc transporter permease | AMED_RS46710 | Not Available | Negative | 9984659 - 9985636 | 33703.9 |
| substrate-binding domain-containing protein | AMED_RS46715 | Not Available | Negative | 9985666 - 9986682 | 34782.1 |
| laci family dna-binding transcriptional regulator | AMED_RS46720 | Not Available | Positive | 9986791 - 9987828 | 36604.0 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
