Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| class ii fructose-bisphosphate aldolase | AMED_RS46570 | Not Available | Negative | 9961404 - 9962435 | 36674.4 |
| llm class f420-dependent oxidoreductase | AMED_RS46575 | Not Available | Negative | 9962596 - 9963417 | 29061.4 |
| aldo/keto reductase | AMED_RS46580 | Not Available | Positive | 9963493 - 9964401 | 32445.9 |
| sdr family oxidoreductase | AMED_RS46585 | Not Available | Positive | 9964484 - 9965395 | 31662.5 |
| nad(p)/fad-dependent oxidoreductase | AMED_RS46595 | Not Available | Positive | 9965842 - 9967314 | 54833.5 |
| metal-dependent hydrolase | AMED_RS46600 | Not Available | Positive | 9967374 - 9967832 | 16967.4 |
| ferredoxin reductase | AMED_RS46605 | Not Available | Positive | 9967829 - 9968527 | 25073.4 |
| 2fe-2s iron-sulfur cluster binding domain-containing protein | AMED_RS46610 | Not Available | Positive | 9968524 - 9968820 | 10256.7 |
| ycii family protein | AMED_RS46615 | Not Available | Negative | 9968815 - 9969093 | 10311.3 |
| rna polymerase sigma factor | AMED_RS46620 | Not Available | Positive | 9969294 - 9969866 | 20714.9 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
