Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)-binding domain-containing protein | AMED_RS04575 | Not Available | Positive | 949994 - 951535 | 58064.5 |
| alpha-hydroxy acid oxidase | AMED_RS04580 | Not Available | Positive | 951535 - 952605 | 37983.5 |
| cytochrome p450 | AMED_RS04585 | Not Available | Positive | 952602 - 953867 | 46981.8 |
| cation:proton antiporter | AMED_RS04590 | Not Available | Positive | 953864 - 955144 | 43710.2 |
| response regulator transcription factor | AMED_RS04595 | Not Available | Positive | 955208 - 955855 | 23856.0 |
| sensor histidine kinase kdpd | AMED_RS04600 | Not Available | Positive | 955852 - 957045 | 42199.9 |
| heat repeat domain-containing protein | AMED_RS04605 | Not Available | Negative | 957158 - 958432 | 46858.5 |
| histidine--trna ligase | AMED_RS04610 | Not Available | Negative | 958489 - 959778 | 47112.1 |
| hypothetical protein | AMED_RS04615 | Not Available | Negative | 959802 - 960191 | 13686.3 |
| amidohydrolase family protein | AMED_RS04620 | Not Available | Negative | 960278 - 961444 | 40537.1 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
