Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hnh endonuclease family protein | AMED_RS46520 | Not Available | Positive | 9950090 - 9950728 | 22934.8 |
| glycosyltransferase | AMED_RS46525 | Not Available | Positive | 9950747 - 9951865 | 38913.0 |
| fad/nad(p)-binding domain-containing protein | AMED_RS46530 | Not Available | Negative | 9951923 - 9953803 | 67953.7 |
| hypothetical protein | AMED_RS46535 | Not Available | Positive | 9954111 - 9954407 | 10913.8 |
| mfs transporter | AMED_RS46540 | Not Available | Positive | 9954722 - 9955984 | 43783.2 |
| ggdef domain-containing protein | AMED_RS46545 | Not Available | Positive | 9956307 - 9957470 | 40881.7 |
| tetr/acrr family transcriptional regulator | AMED_RS46550 | Not Available | Negative | 9957477 - 9958121 | 23356.7 |
| lipase family protein | AMED_RS46555 | Not Available | Positive | 9958210 - 9959433 | 42754.7 |
| duf3151 domain-containing protein | AMED_RS46560 | Not Available | Negative | 9959476 - 9959886 | 14473.8 |
| hypothetical protein | AMED_RS46565 | Not Available | Positive | 9960173 - 9961354 | 43311.3 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
