Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AMED_RS46470 | Not Available | Negative | 9938618 - 9939487 | 32099.1 |
| ompa family protein | AMED_RS46475 | Not Available | Negative | 9939507 - 9940640 | 38126.5 |
| carbohydrate kinase family protein | AMED_RS46480 | Not Available | Positive | 9941199 - 9942563 | 49465.1 |
| gtp cyclohydrolase ii riba | AMED_RS46485 | Not Available | Positive | 9942560 - 9943291 | 26512.9 |
| aromatic acid/h+ symport family mfs transporter | AMED_RS46490 | Not Available | Negative | 9943374 - 9944615 | 42505.2 |
| sodium:proton antiporter | AMED_RS46495 | Not Available | Positive | 9944764 - 9946398 | 57525.3 |
| tigr03564 family f420-dependent llm class oxidoreductase | AMED_RS46500 | Not Available | Negative | 9946379 - 9947287 | 31266.4 |
| osmc family protein | AMED_RS46505 | Not Available | Positive | 9947407 - 9947904 | 17957.1 |
| adenylosuccinate synthase | AMED_RS46510 | Not Available | Negative | 9947913 - 9949199 | 46464.4 |
| hypothetical protein | AMED_RS46515 | Not Available | Positive | 9949312 - 9949956 | 22888.7 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
