Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transglycosylase slt domain-containing protein | AMED_RS46420 | Not Available | Negative | 9928074 - 9929210 | 38811.9 |
| hypothetical protein | AMED_RS46425 | Not Available | Negative | 9929280 - 9929591 | 11130.2 |
| esx secretion-associated protein espg | AMED_RS46430 | Not Available | Negative | 9929726 - 9930484 | 27186.1 |
| hypothetical protein | AMED_RS46435 | Not Available | Negative | 9930487 - 9932124 | 54889.5 |
| duf3558 domain-containing protein | AMED_RS46440 | Not Available | Negative | 9932134 - 9932700 | 19542.1 |
| hypothetical protein | AMED_RS46445 | Not Available | Negative | 9932717 - 9933058 | 12285.5 |
| phosphoribosylamine--glycine ligase | AMED_RS46450 | Not Available | Negative | 9933280 - 9934554 | 43250.6 |
| glycerophosphodiester phosphodiesterase | AMED_RS46455 | Not Available | Positive | 9934832 - 9935968 | 41274.8 |
| serine hydrolase | AMED_RS46460 | Not Available | Positive | 9936009 - 9936962 | 33940.2 |
| amino acid permease | AMED_RS46465 | Not Available | Positive | 9937033 - 9938565 | 54786.9 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
