Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| beta-propeller fold lactonase family protein | AMED_RS46370 | Not Available | Positive | 9920330 - 9921334 | 34127.1 |
| fadr/gntr family transcriptional regulator | AMED_RS46375 | Not Available | Positive | 9921386 - 9922090 | 25619.5 |
| tetr/acrr family transcriptional regulator | AMED_RS46380 | Not Available | Negative | 9922072 - 9922686 | 21941.3 |
| hypothetical protein | AMED_RS46385 | Not Available | Negative | 9922721 - 9923431 | 23625.5 |
| sige family rna polymerase sigma factor | AMED_RS46390 | Not Available | Negative | 9923424 - 9923933 | 19301.7 |
| low specificity l-threonine aldolase | AMED_RS46395 | Not Available | Positive | 9924070 - 9925092 | 35712.8 |
| had family phosphatase | AMED_RS46400 | Not Available | Positive | 9925110 - 9925688 | 20832.5 |
| sam-dependent methyltransferase | AMED_RS46405 | Not Available | Positive | 9925774 - 9926592 | 29695.1 |
| hypothetical protein | AMED_RS46410 | Not Available | Negative | 9926594 - 9926785 | 6827.79 |
| pyridoxal phosphate-dependent aminotransferase | AMED_RS46415 | Not Available | Negative | 9926883 - 9928064 | 41833.5 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
