Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoribosylformylglycinamidine synthase subunit purs | AMED_RS46270 | Not Available | Negative | 9901541 - 9901780 | 8576.25 |
| gmc family oxidoreductase | AMED_RS46275 | Not Available | Positive | 9901936 - 9903510 | 56853.4 |
| aldehyde dehydrogenase family protein | AMED_RS46280 | Not Available | Negative | 9903761 - 9905257 | 52610.9 |
| mfs transporter | AMED_RS46285 | Not Available | Negative | 9905292 - 9906431 | 38347.0 |
| duf5937 family protein | AMED_RS46290 | Not Available | Positive | 9906493 - 9907425 | 33208.4 |
| tyrosine-protein phosphatase | AMED_RS46295 | Not Available | Positive | 9907429 - 9908199 | 27608.4 |
| mbl fold metallo-hydrolase | AMED_RS46300 | Not Available | Positive | 9908234 - 9908869 | 22464.9 |
| duf2334 domain-containing protein | AMED_RS46305 | Not Available | Negative | 9908866 - 9909561 | 24880.0 |
| nadph-dependent fmn reductase | AMED_RS46310 | Not Available | Negative | 9909636 - 9910100 | 16268.3 |
| phosphoribosylaminoimidazolesuccinocarboxamide synthase | AMED_RS46315 | Not Available | Negative | 9910021 - 9911025 | 36494.7 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
