Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vii secretion system-associated protein | AMED_RS46220 | Not Available | Positive | 9888406 - 9889110 | 25806.6 |
| lysozyme | AMED_RS46225 | Not Available | Positive | 9889215 - 9890015 | 28417.9 |
| lysozyme | AMED_RS46230 | Not Available | Positive | 9890208 - 9891077 | 31714.5 |
| hypothetical protein | AMED_RS46235 | Not Available | Positive | 9891296 - 9892195 | 30826.6 |
| pentapeptide repeat-containing protein | AMED_RS46240 | Not Available | Positive | 9892200 - 9893306 | 41205.9 |
| metal-dependent hydrolase | AMED_RS46245 | Not Available | Positive | 9893647 - 9894442 | 29527.9 |
| phosphoribosylformylglycinamidine synthase subunit purl | AMED_RS46250 | Not Available | Negative | 9894556 - 9896838 | 80909.9 |
| abc transporter atp-binding protein | AMED_RS46255 | Not Available | Positive | 9897276 - 9898910 | 57126.2 |
| abc transporter atp-binding protein | AMED_RS46260 | Not Available | Positive | 9898907 - 9900652 | 61659.1 |
| phosphoribosylformylglycinamidine synthase subunit purq | AMED_RS46265 | Not Available | Negative | 9900867 - 9901544 | 24102.8 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
